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CAZyme Information: OTA39890.1

You are here: Home > Sequence: OTA39890.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hortaea werneckii
Lineage Ascomycota; Dothideomycetes; ; Teratosphaeriaceae; Hortaea; Hortaea werneckii
CAZyme ID OTA39890.1
CAZy Family GT69
CAZyme Description Beta_helix domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1Z5TV43]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
374 39764.60 6.8773
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HwerneckiiEXF-2000 15649 1157616 29 15620
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in OTA39890.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 48 361 8.2e-117 0.8472622478386167

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
404168 Beta_helix 3.27e-04 95 275 3 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.87e-157 10 374 8 396
2.65e-149 4 374 3 392
1.94e-143 4 374 4 409
7.49e-139 19 371 19 390
7.49e-139 19 371 19 390

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.45e-40 102 374 116 383
Chain A, Pectate lyase [Dickeya chrysanthemi]
5.51e-18 125 281 147 321
Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.01e-39 102 374 141 408
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
1.04e-38 102 353 141 386
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
2.01e-18 22 284 392 644
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001666 0.998313 CS pos: 18-19. Pr: 0.9655

TMHMM  Annotations      help

There is no transmembrane helices in OTA39890.1.