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CAZyme Information: OTA33385.1

You are here: Home > Sequence: OTA33385.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hortaea werneckii
Lineage Ascomycota; Dothideomycetes; ; Teratosphaeriaceae; Hortaea; Hortaea werneckii
CAZyme ID OTA33385.1
CAZy Family GH43
CAZyme Description Chitinase [Source:UniProtKB/TrEMBL;Acc:A0A1Z5TBH0]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
604 65644.68 4.6504
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HwerneckiiEXF-2000 15649 1157616 29 15620
Gene Location Start: 24285; End:27049  Strand: -

Full Sequence      Download help

MWSRIGNSYG  QGSGELAQQR  LATYCADTDI  DVIPMAFLYQ  ITTGIDGQPV  VNFANQQNNC60
ITFPGTGLLN  CPEIADDIVT  CQLKYKKTIF  LSVGGATYTE  GGFSSRDVAK  QAAEKIWATF120
GPKQDESTLR  PFGSAVIDGF  DIDFETTMNN  AAPFANRLRE  LMDSDATKQY  FLTAAPQCPY180
PDIADDEMLS  GGTYFDAIFI  QFYNNYCGVN  SFVPGSAEQI  NFNFETWNNW  ARTVSANPDV240
KILLGVPANT  GAAGTGYLPV  SGLGPIIAYC  KQFPSFAGVM  MWDVSQATST  TNNIQAQGSS300
GETNMASDDA  RVQNNKDFQL  NELFNVKNKV  ALITGGGSGI  GLMYTQALAV  NGAKVYICGR360
TGEKLDTVAK  TYSQDIPGSI  IPITADITSK  QEIQKLYDEL  EKREGHLDIL  VNNAGIMSDK420
TITTEAQTPE  EMKKNMFDDD  KNSFQDWDDI  YRTNVSQCYF  MSTCFIPLLA  KATQHTHGYS480
GTIINVSSIS  GQVKTSQHHP  QYNASKAACI  HLTRMLANEI  AQNEIKIRVN  TIAPGVFPSE540
MTAGSSGANQ  KSAIPKDKYE  NKVPAARPGN  DRDMASTLLF  CATNTYLNGQ  TITVDGGYTL600
AAGM604

Enzyme Prediction      help

EC 3.2.1.14:1

CAZyme Signature Domains help

Created with Snap30609012015118121124127130233236239242245348351354357318203GH18
Family Start End Evalue family coverage
GH18 20 255 1e-22 0.625

CDD Domains      download full data without filtering help

Created with Snap3060901201511812112412713023323623924224534835135435739292GH18_hevamine_XipI_class_III331595SDR_c324599FabG324601fabG323597RhlG_SDR_c
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
119356 GH18_hevamine_XipI_class_III 2.17e-100 9 292 7 273
This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.
212491 SDR_c 1.64e-55 331 595 1 234
classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.
223959 FabG 2.57e-52 324 599 1 251
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism, General function prediction only].
235500 fabG 3.68e-51 324 601 1 248
3-ketoacyl-(acyl-carrier-protein) reductase; Validated
187646 RhlG_SDR_c 2.25e-50 323 597 1 250
RhlG and related beta-ketoacyl reductases, classical (c) SDRs. Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.

CAZyme Hits      help

Created with Snap3060901201511812112412713023323623924224534835135435737300QGA16639.1|GH187286APA13982.1|CBM1|GH187295QVM12361.1|GH187295AAP46398.1|GH187287BCR98914.1|GH18
Hit ID E-Value Query Start Query End Hit Start Hit End
QGA16639.1|GH18 2.14e-116 7 300 38 328
APA13982.1|CBM1|GH18 8.31e-115 7 286 39 311
QVM12361.1|GH18 1.66e-114 7 295 37 323
AAP46398.1|GH18 1.05e-112 7 295 37 323
BCR98914.1|GH18 3.85e-112 7 287 39 317

PDB Hits      download full data without filtering help

Created with Snap30609012015118121124127130233236239242245348351354357392932UY2_A22932XTK_A32932XVN_A32934TX6_A92832GSJ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2UY2_A 3.58e-54 9 293 12 275
ScCTS1_apo crystal structure [Saccharomyces cerevisiae],2UY3_A ScCTS1_8-chlorotheophylline crystal structure [Saccharomyces cerevisiae],2UY4_A ScCTS1_acetazolamide crystal structure [Saccharomyces cerevisiae],2UY5_A ScCTS1_kinetin crystal structure [Saccharomyces cerevisiae],4TXE_A ScCTS1 in complex with compound 5 [Saccharomyces cerevisiae]
2XTK_A 3.48e-36 2 293 1 293
ChiA1 from Aspergillus fumigatus in complex with acetazolamide [Aspergillus fumigatus A1163],2XTK_B ChiA1 from Aspergillus fumigatus in complex with acetazolamide [Aspergillus fumigatus A1163],2XUC_A Natural product-guided discovery of a fungal chitinase inhibitor [Aspergillus fumigatus],2XUC_B Natural product-guided discovery of a fungal chitinase inhibitor [Aspergillus fumigatus],2XUC_C Natural product-guided discovery of a fungal chitinase inhibitor [Aspergillus fumigatus],2XVP_A ChiA1 from Aspergillus fumigatus, apostructure [Aspergillus fumigatus A1163],2XVP_B ChiA1 from Aspergillus fumigatus, apostructure [Aspergillus fumigatus A1163]
2XVN_A 4.67e-36 3 293 1 292
A. fumigatus chitinase A1 phenyl-methylguanylurea complex [Aspergillus fumigatus],2XVN_B A. fumigatus chitinase A1 phenyl-methylguanylurea complex [Aspergillus fumigatus],2XVN_C A. fumigatus chitinase A1 phenyl-methylguanylurea complex [Aspergillus fumigatus]
4TX6_A 4.78e-36 3 293 2 293
AfChiA1 in complex with compound 1 [Aspergillus fumigatus A1163],4TX6_B AfChiA1 in complex with compound 1 [Aspergillus fumigatus A1163]
2GSJ_A 1.21e-31 9 283 7 254
cDNA cloning and 1.75A crystal structure determination of PPL2, a novel chimerolectin from Parkia platycephala seeds exhibiting endochitinolytic activity [Parkia platycephala]

Swiss-Prot Hits      download full data without filtering help

Created with Snap30609012015118121124127130233236239242245348351354357329292sp|D4B4X4|CHI33_ARTBC9291sp|Q12713|CHI33_TRIHA3293sp|P40954|CHI3_CANAL9293sp|P29029|CHIT_YEAST2287sp|P29026|CHI1_RHIOL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
sp|D4B4X4|CHI33_ARTBC 5.93e-99 29 292 39 302
Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03514 PE=1 SV=2
sp|Q12713|CHI33_TRIHA 9.60e-80 9 291 33 310
Endochitinase 33 OS=Trichoderma harzianum OX=5544 GN=chit33 PE=1 SV=1
sp|P40954|CHI3_CANAL 1.46e-53 3 293 23 298
Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHT3 PE=1 SV=2
sp|P29029|CHIT_YEAST 8.44e-51 9 293 33 296
Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CTS1 PE=1 SV=2
sp|P29026|CHI1_RHIOL 1.09e-50 2 287 24 297
Chitinase 1 OS=Rhizopus oligosporus OX=4847 GN=CHI1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999783 0.000261

TMHMM  Annotations      help

There is no transmembrane helices in OTA33385.1.