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CAZyme Information: OTA31349.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hortaea werneckii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Teratosphaeriaceae; Hortaea; Hortaea werneckii | |||||||||||
| CAZyme ID | OTA31349.1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Rhamnogalacturonase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 66 | 376 | 2.1e-53 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 177865 | PLN02218 | 1.49e-23 | 37 | 370 | 63 | 415 | polygalacturonase ADPG |
| 215540 | PLN03010 | 1.08e-21 | 43 | 373 | 48 | 387 | polygalacturonase |
| 395231 | Glyco_hydro_28 | 1.77e-20 | 149 | 370 | 85 | 312 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 178580 | PLN03003 | 1.72e-19 | 43 | 367 | 25 | 364 | Probable polygalacturonase At3g15720 |
| 165802 | PLN02155 | 9.38e-19 | 43 | 375 | 29 | 378 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.71e-215 | 22 | 454 | 18 | 442 | |
| 1.30e-210 | 20 | 454 | 20 | 447 | |
| 1.37e-210 | 13 | 453 | 9 | 442 | |
| 5.25e-210 | 20 | 454 | 20 | 447 | |
| 1.66e-209 | 20 | 454 | 20 | 447 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.92e-203 | 22 | 452 | 1 | 422 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 1.15e-20 | 49 | 368 | 23 | 368 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.04e-216 | 22 | 454 | 18 | 442 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
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| 2.30e-211 | 20 | 454 | 20 | 447 | Probable rhamnogalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgB PE=3 SV=1 |
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| 9.33e-211 | 20 | 454 | 20 | 447 | Rhamnogalacturonase B OS=Aspergillus niger OX=5061 GN=rhgB PE=1 SV=1 |
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| 8.18e-209 | 15 | 453 | 14 | 445 | Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1 |
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| 4.44e-205 | 21 | 450 | 21 | 445 | Probable rhamnogalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000436 | 0.999553 | CS pos: 18-19. Pr: 0.9608 |