logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: OTA28479.1

You are here: Home > Sequence: OTA28479.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hortaea werneckii
Lineage Ascomycota; Dothideomycetes; ; Teratosphaeriaceae; Hortaea; Hortaea werneckii
CAZyme ID OTA28479.1
CAZy Family GH16
CAZyme Description F5/8 type C domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1Z5T153]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
664 75647.66 4.4071
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HwerneckiiEXF-2000 15649 1157616 29 15620
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in OTA28479.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 33 495 6.8e-163 0.9498956158663883

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225942 GDB1 2.73e-04 183 357 385 541
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 10 664 17 664
4.82e-314 21 664 22 667
6.84e-314 21 664 22 667
9.70e-314 21 664 22 667
2.77e-313 21 664 22 667

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.14e-77 37 502 653 1101
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
1.94e-73 37 502 653 1101
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
2.38e-11 37 485 305 784
Crystal structure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.19e-14 37 664 336 1047
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000553 0.999424 CS pos: 13-14. Pr: 0.9277

TMHMM  Annotations      help

There is no transmembrane helices in OTA28479.1.