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CAZyme Information: ORE08177.1

You are here: Home > Sequence: ORE08177.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus microsporus
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus microsporus
CAZyme ID ORE08177.1
CAZy Family GT2
CAZyme Description Alginate_lyase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1X0R7Y2]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
754 87772.26 7.2442
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RmicrosporusATCC52814 11554 N/A 58 11496
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ORE08177.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 478 582 3.9e-16 0.3763440860215054

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398861 Alginate_lyase 5.09e-17 371 650 43 270
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.17e-85 2 675 253 909
2.23e-82 3 675 402 1056
2.04e-80 2 672 56 700
6.49e-79 2 752 244 936
3.47e-77 2 630 31 636

PDB Hits      help

ORE08177.1 has no PDB hit.

Swiss-Prot Hits      help

ORE08177.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000087 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in ORE08177.1.