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CAZyme Information: ORE04697.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rhizopus microsporus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus microsporus | |||||||||||
| CAZyme ID | ORE04697.1 | |||||||||||
| CAZy Family | GH20 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 45 | 375 | 4.6e-71 | 0.9784615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 177865 | PLN02218 | 6.02e-53 | 35 | 379 | 75 | 427 | polygalacturonase ADPG |
| 395231 | Glyco_hydro_28 | 4.22e-51 | 96 | 374 | 42 | 317 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 2.10e-48 | 35 | 369 | 60 | 406 | Probable polygalacturonase |
| 215540 | PLN03010 | 1.70e-46 | 36 | 372 | 59 | 389 | polygalacturonase |
| 178580 | PLN03003 | 2.46e-45 | 4 | 379 | 7 | 382 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.31e-156 | 1 | 382 | 1 | 382 | |
| 1.31e-156 | 1 | 382 | 1 | 382 | |
| 3.11e-127 | 10 | 381 | 6 | 379 | |
| 4.23e-84 | 28 | 381 | 26 | 395 | |
| 4.47e-55 | 28 | 375 | 24 | 390 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.90e-38 | 35 | 371 | 27 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 1.04e-26 | 35 | 372 | 7 | 333 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 2.00e-25 | 102 | 372 | 71 | 338 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.00e-25 | 102 | 372 | 71 | 338 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 6.30e-25 | 102 | 372 | 63 | 330 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.71e-154 | 1 | 382 | 1 | 384 | Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1 |
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| 3.52e-142 | 1 | 382 | 1 | 362 | Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg13 PE=1 SV=1 |
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| 1.22e-140 | 1 | 382 | 1 | 384 | Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1 |
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| 2.98e-133 | 1 | 382 | 1 | 372 | Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg14 PE=1 SV=1 |
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| 2.43e-53 | 28 | 371 | 54 | 426 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000252 | 0.999738 | CS pos: 26-27. Pr: 0.9719 |