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CAZyme Information: ORE01422.1

You are here: Home > Sequence: ORE01422.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus microsporus
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus microsporus
CAZyme ID ORE01422.1
CAZy Family AA5
CAZyme Description pectin lyase-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
262 KV922137|CGC1 28887.62 8.9481
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RmicrosporusATCC52814 11554 N/A 58 11496
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 21 248 1.6e-47 0.6584615384615384

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.76e-33 23 250 94 314
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 1.10e-30 9 246 181 417
polygalacturonase ADPG
215540 PLN03010 8.37e-29 33 253 176 391
polygalacturonase
215426 PLN02793 1.48e-25 23 248 186 406
Probable polygalacturonase
165802 PLN02155 3.78e-23 21 243 152 369
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.69e-80 7 262 125 383
5.69e-80 7 262 125 383
8.67e-73 5 260 117 379
9.17e-47 24 262 152 397
1.10e-34 12 238 74 295

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.60e-20 16 250 106 342
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
9.51e-19 13 245 106 334
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
9.51e-19 13 245 106 334
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
3.13e-18 13 245 98 326
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.13e-17 13 245 98 327
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.23e-74 7 260 127 383
Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1
2.79e-69 6 260 113 371
Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg14 PE=1 SV=1
3.44e-68 22 260 120 361
Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg13 PE=1 SV=1
4.46e-68 7 260 127 383
Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1
2.73e-31 10 262 208 457
Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000056 0.000013

TMHMM  Annotations      help

There is no transmembrane helices in ORE01422.1.