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CAZyme Information: ORE01080.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rhizopus microsporus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus microsporus | |||||||||||
| CAZyme ID | ORE01080.1 | |||||||||||
| CAZy Family | AA2 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:24 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 44 | 341 | 1.2e-54 | 0.9538461538461539 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 7.05e-39 | 115 | 343 | 93 | 314 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 7.49e-39 | 31 | 346 | 57 | 391 | polygalacturonase |
| 177865 | PLN02218 | 1.19e-36 | 31 | 339 | 78 | 417 | polygalacturonase ADPG |
| 215426 | PLN02793 | 5.66e-31 | 75 | 330 | 111 | 394 | Probable polygalacturonase |
| 165802 | PLN02155 | 1.42e-24 | 124 | 336 | 162 | 369 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.72e-107 | 1 | 355 | 1 | 383 | |
| 1.72e-107 | 1 | 355 | 1 | 383 | |
| 1.72e-101 | 13 | 353 | 9 | 379 | |
| 7.30e-64 | 5 | 355 | 6 | 397 | |
| 3.76e-50 | 13 | 348 | 12 | 389 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.06e-29 | 31 | 341 | 26 | 371 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 1.65e-18 | 125 | 330 | 126 | 326 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.65e-18 | 125 | 330 | 126 | 326 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.09e-18 | 125 | 330 | 118 | 318 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.26e-15 | 124 | 332 | 168 | 376 | Chain A, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.59e-107 | 1 | 353 | 1 | 361 | Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg13 PE=1 SV=1 |
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| 3.13e-103 | 6 | 353 | 11 | 383 | Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1 |
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| 1.87e-93 | 1 | 353 | 1 | 371 | Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg14 PE=1 SV=1 |
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| 5.60e-93 | 1 | 353 | 1 | 383 | Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1 |
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| 2.37e-44 | 18 | 353 | 47 | 436 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000206 | 0.999787 | CS pos: 23-24. Pr: 0.9758 |