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CAZyme Information: ODM18273.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus cristatus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus cristatus | |||||||||||
| CAZyme ID | ODM18273.1 | |||||||||||
| CAZy Family | GH17 | |||||||||||
| CAZyme Description | Rhamnogalacturonase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 61 | 371 | 4.4e-55 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 8.73e-23 | 145 | 368 | 85 | 312 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 1.58e-21 | 26 | 356 | 56 | 408 | polygalacturonase ADPG |
| 215540 | PLN03010 | 2.93e-21 | 34 | 373 | 43 | 391 | polygalacturonase |
| 215120 | PLN02188 | 2.33e-20 | 1 | 371 | 1 | 390 | polygalacturonase/glycoside hydrolase family protein |
| 215426 | PLN02793 | 6.63e-16 | 127 | 374 | 151 | 412 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 490 | 1 | 490 | |
| 5.27e-250 | 1 | 467 | 1 | 468 | |
| 6.67e-248 | 8 | 452 | 9 | 453 | |
| 6.67e-248 | 8 | 452 | 9 | 453 | |
| 6.67e-248 | 8 | 452 | 9 | 453 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.15e-219 | 18 | 441 | 1 | 422 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 1.61e-19 | 45 | 364 | 23 | 368 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 6.80e-10 | 195 | 332 | 167 | 310 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.37e-251 | 1 | 467 | 1 | 468 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
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| 1.18e-248 | 8 | 452 | 9 | 453 | Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1 |
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| 3.39e-248 | 8 | 452 | 9 | 453 | Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1 |
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| 2.21e-237 | 6 | 445 | 9 | 448 | Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1 |
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| 5.40e-235 | 5 | 443 | 5 | 443 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000232 | 0.999758 | CS pos: 17-18. Pr: 0.9770 |