You are browsing environment: FUNGIDB
CAZyme Information: OAG23910.1
You are here: Home > Sequence: OAG23910.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alternaria alternata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata | |||||||||||
| CAZyme ID | OAG23910.1 | |||||||||||
| CAZy Family | GH88 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 47 | 381 | 3.3e-70 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.63e-34 | 109 | 387 | 47 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215120 | PLN02188 | 2.14e-33 | 33 | 378 | 48 | 389 | polygalacturonase/glycoside hydrolase family protein |
| 177865 | PLN02218 | 2.00e-32 | 33 | 380 | 79 | 419 | polygalacturonase ADPG |
| 215426 | PLN02793 | 3.29e-31 | 111 | 376 | 141 | 406 | Probable polygalacturonase |
| 178580 | PLN03003 | 1.27e-27 | 113 | 389 | 113 | 385 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.06e-261 | 6 | 403 | 6 | 403 | |
| 9.59e-175 | 7 | 402 | 8 | 425 | |
| 1.16e-122 | 13 | 313 | 14 | 331 | |
| 8.59e-108 | 6 | 402 | 6 | 438 | |
| 1.41e-103 | 36 | 402 | 42 | 438 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.74e-38 | 25 | 388 | 17 | 383 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
|
| 5.98e-19 | 110 | 387 | 73 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 5.98e-19 | 110 | 387 | 73 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 3.40e-18 | 110 | 387 | 65 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 3.56e-16 | 110 | 359 | 66 | 326 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.35e-60 | 16 | 387 | 21 | 436 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2 |
|
| 3.72e-60 | 2 | 389 | 4 | 417 | Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2 |
|
| 4.52e-60 | 24 | 387 | 28 | 435 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2 |
|
| 4.52e-60 | 24 | 387 | 28 | 435 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1 |
|
| 6.50e-60 | 16 | 387 | 21 | 436 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000255 | 0.999706 | CS pos: 18-19. Pr: 0.9799 |