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CAZyme Information: OAG23076.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alternaria alternata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata | |||||||||||
| CAZyme ID | OAG23076.1 | |||||||||||
| CAZy Family | GH7 | |||||||||||
| CAZyme Description | the polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 41 | 359 | 1.2e-77 | 0.9446153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 5.51e-133 | 45 | 365 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 1.76e-25 | 31 | 304 | 94 | 421 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 177865 | PLN02218 | 2.71e-23 | 15 | 353 | 53 | 414 | polygalacturonase ADPG |
| 215426 | PLN02793 | 1.51e-21 | 181 | 324 | 226 | 371 | Probable polygalacturonase |
| 178580 | PLN03003 | 3.37e-21 | 34 | 320 | 39 | 330 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.16e-198 | 1 | 365 | 1 | 364 | |
| 3.58e-187 | 1 | 364 | 1 | 364 | |
| 9.10e-184 | 1 | 365 | 1 | 365 | |
| 1.10e-181 | 6 | 363 | 1 | 358 | |
| 1.10e-181 | 6 | 363 | 1 | 358 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.83e-180 | 28 | 363 | 1 | 335 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 8.27e-164 | 20 | 365 | 1 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.35e-163 | 20 | 365 | 1 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.55e-159 | 28 | 365 | 1 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.71e-148 | 19 | 365 | 19 | 362 | Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.84e-199 | 1 | 365 | 1 | 364 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 1.98e-168 | 6 | 363 | 1 | 359 | Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum OX=290576 GN=PG1 PE=3 SV=1 |
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| 4.61e-168 | 7 | 365 | 7 | 367 | Polygalacturonase OS=Penicillium digitatum OX=36651 GN=PG1 PE=3 SV=1 |
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| 6.34e-168 | 24 | 365 | 33 | 376 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
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| 9.61e-163 | 14 | 365 | 12 | 367 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000219 | 0.999748 | CS pos: 27-28. Pr: 0.7184 |