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CAZyme Information: OAG21998.1

You are here: Home > Sequence: OAG21998.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alternaria alternata
Lineage Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata
CAZyme ID OAG21998.1
CAZy Family GH43
CAZyme Description putative endo-exoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
472 KV441475|CGC3 50279.22 8.3052
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AalternataSRC1lrK2f 13577 N/A 111 13466
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 26 467 8.9e-197 0.9954853273137697

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 1.85e-22 7 467 8 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
405300 Glyco_hydr_30_2 3.01e-10 28 340 3 356
O-Glycosyl hydrolase family 30.
396577 Glyco_hydro_59 2.83e-08 67 337 28 251
Glycosyl hydrolase family 59.
307945 Glyco_hydro_30 6.28e-06 40 237 1 194
Glycosyl hydrolase family 30 TIM-barrel domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-272 11 470 31 495
1.90e-257 11 470 31 495
5.61e-229 4 471 3 470
7.69e-197 19 471 19 480
4.15e-182 3 471 2 474

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.60e-181 27 471 3 450
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
4.55e-181 19 471 1 457
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
1.49e-128 29 467 24 470
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
1.37e-127 29 467 95 541
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
5.78e-115 28 469 24 454
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.38e-183 3 471 2 474
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
1.24e-09 38 420 71 466
Endo-1,6-beta-D-glucanase neg1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=neg1 PE=1 SV=1
7.66e-09 117 469 88 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
9.38e-09 28 247 92 307
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1
1.09e-06 23 276 81 333
Putative glucosylceramidase 2 OS=Caenorhabditis elegans OX=6239 GN=gba-2 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001164 0.998815 CS pos: 24-25. Pr: 0.6045

TMHMM  Annotations      help

There is no transmembrane helices in OAG21998.1.