CAZyme Information: OAG18603.1

Basic Information

• Species: Alternaria alternata
• Lineage: Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata
• CAZyme ID: OAG18603.1
• CAZy Family: GH128
• CAZyme Description: pectin lyase-like protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
887		96036.75	4.6171

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AalternataSRC1lrK2f	13577	N/A	111	13466

• Gene Location: location=KV441483:480058-483035(-)

Full Sequence      

MAAGARHEAKEKDELRSEAGSAGVHDEEAAEERWYHSEDEDIKCLLDTGEHESSTAQRTS
HPGYPKLETRSFQNFDWRHETIPLRSIFRRLTTPNFNARTAIMVAFSAGALLLTLRVLLS
ATPSTAVPVAQAPAPSSAPAAPAPAAGASSYWLEKIERQGQAPFNPNPASYKVFRNVKEL
GAKGDGSTDDTEIINKIIADGDRCGEGCDSTTTTPALIYFPAGTYMISKPIIQYYYTQFV
GDPLNMPILKATPDFEGMGLIDADPYIPGGDGANWYTNQNNFYRQVRNFVIDISATKAAA
GIHWQVSQATSLQNIVFEMAKGDAGKDQKGIFQDNGSGGFMTDLTFNGGAIGAFMGSQQF
TIRNMTFNDCGTAIFQNWNWLFTYKSIFINNCQVGLDMANSPANQTVGSVLLLDSKFTNT
PIGINSSFTENSIPTTGGTLILDNCDFTGSEKAIVGAAGNTILEGGKKVETWAQGNALAA
GATLGRVQGDVNGAPAKPQSLQGNNGWFERSKPQYENVDVSKFVSLKSKGAVGDGKTDDT
AAIQAAIDGLQEGQVLHVDHGAYLITKTVVIPAEKNVKMVGEVYSTFFITGEFFSNMDDP
KPGFQVGAKSGDKGSFEASDLIIGTQGPAPGGILMEWNINAESGAAGLWDVHFRVGGYAG
TKLQSSNCKKNPDATHEPNPECIGSFMQLHITKNSNGYFENVWLWTADHELDQDDHSQID
IYNGRGMLVESQGPVWMYGTASEHSQMSQYQFSGAKDIFYGAIQTETPYYQPNPTAAVPF
TKNDKFFDPDMSQAKAAWAVRVTDGSESIWSYGAGTYSFFQNYDQDCVVGQNCQQDMNEV
ANSTNINWFGLSTKASVNMITMGGQGVAKDEDNRSNFCATLAIFAQA

Enzyme Prediction     

EC	3.2.1.58:16

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	142	884	1.6e-293	0.9918918918918919

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	1.55e-97	174	397	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	4.23e-07	523	662	1	143	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721	Pgu1	0.005	524	564	83	125	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAE7031300.1|GH55	0.0	103	886	1	785
CBX99626.1|GH55	0.0	7	886	93	964
QRC92325.1|GH55	0.0	2	887	7	885
AAV00002.1|GH55|3.2.1.58	0.0	103	887	1	777
AAC09172.1|GH55|3.2.1.58	0.0	103	887	1	777

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	1.34e-286	149	884	4	753	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	2.36e-206	146	886	21	757	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4B0V1|E13B_ARTBC	5.94e-295	109	886	12	875	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P49426|EXG1_COCCA	6.34e-199	151	885	48	785	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|P53626|E13B_TRIHA	4.15e-51	148	863	34	735	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000029	0.000005

TMHMM  Annotations     

There is no transmembrane helices in OAG18603.1.