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CAZyme Information: OAG18459.1

You are here: Home > Sequence: OAG18459.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alternaria alternata
Lineage Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata
CAZyme ID OAG18459.1
CAZy Family GH12
CAZyme Description FAD/NAD(P)-binding domain-containing protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
556 KV441483|CGC7 59710.94 5.6995
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AalternataSRC1lrK2f 13577 N/A 111 13466
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in OAG18459.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 22 554 5.1e-184 0.9817518248175182

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 5.75e-50 24 553 2 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 2.41e-21 423 547 2 143
GMC oxidoreductase. This domain found associated with pfam00732.
235000 PRK02106 4.94e-20 29 552 5 532
choline dehydrogenase; Validated
366272 GMC_oxred_N 2.40e-17 114 303 23 206
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
224154 COG1233 4.05e-08 28 73 2 43
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 552 1 567
2.28e-293 8 554 7 549
4.77e-293 10 556 10 552
2.54e-212 11 554 11 554
2.54e-212 11 554 11 554

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.75e-91 15 553 215 765
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
2.77e-89 27 554 5 545
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
2.68e-87 17 554 217 767
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
2.20e-83 24 554 2 542
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
3.81e-83 30 554 3 537
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.14e-81 12 554 217 769
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
2.15e-16 29 551 4 533
Oxygen-dependent choline dehydrogenase OS=Staphylococcus xylosus OX=1288 GN=betA PE=3 SV=1
6.67e-16 29 551 4 533
Oxygen-dependent choline dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=betA PE=3 SV=1
9.64e-16 18 308 32 324
Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
2.22e-15 29 308 40 319
Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.197966 0.802001 CS pos: 22-23. Pr: 0.7676

TMHMM  Annotations      help

There is no transmembrane helices in OAG18459.1.