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CAZyme Information: OAG18176.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alternaria alternata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata | |||||||||||
| CAZyme ID | OAG18176.1 | |||||||||||
| CAZy Family | GH11 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:25 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 115 | 299 | 5.9e-85 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.60e-53 | 114 | 301 | 3 | 190 | Amb_all domain. |
| 226384 | PelB | 1.37e-15 | 5 | 302 | 12 | 278 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.66e-10 | 125 | 297 | 30 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.63e-236 | 1 | 378 | 1 | 378 | |
| 3.86e-203 | 1 | 378 | 1 | 377 | |
| 2.38e-188 | 1 | 378 | 1 | 379 | |
| 4.80e-188 | 1 | 378 | 1 | 379 | |
| 4.80e-188 | 1 | 378 | 1 | 379 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.22e-153 | 23 | 377 | 3 | 359 | Pectin Lyase B [Aspergillus niger] |
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| 1.53e-149 | 23 | 378 | 3 | 359 | Pectin Lyase A [Aspergillus niger] |
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| 1.77e-148 | 23 | 378 | 3 | 359 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.86e-167 | 1 | 378 | 1 | 380 | Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelA PE=3 SV=1 |
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| 6.65e-167 | 14 | 378 | 13 | 379 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 3.49e-164 | 1 | 378 | 1 | 378 | Probable pectin lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelA PE=3 SV=1 |
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| 3.49e-164 | 1 | 378 | 1 | 378 | Probable pectin lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelB PE=3 SV=1 |
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| 7.53e-164 | 4 | 378 | 5 | 380 | Pectin lyase OS=Colletotrichum gloeosporioides OX=474922 GN=PNLA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000238 | 0.999753 | CS pos: 19-20. Pr: 0.9759 |