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CAZyme Information: OAG18124.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alternaria alternata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata | |||||||||||
| CAZyme ID | OAG18124.1 | |||||||||||
| CAZy Family | GH109 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 79 | 252 | 2.7e-103 | 0.9886363636363636 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 226384 | PelB | 1.15e-63 | 25 | 334 | 33 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 214765 | Amb_all | 1.28e-57 | 83 | 251 | 14 | 186 | Amb_all domain. |
| 366158 | Pec_lyase_C | 6.83e-37 | 79 | 251 | 28 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.11e-192 | 1 | 334 | 1 | 335 | |
| 4.37e-177 | 1 | 334 | 185 | 519 | |
| 1.50e-167 | 1 | 334 | 1 | 336 | |
| 1.92e-163 | 23 | 334 | 28 | 336 | |
| 8.93e-159 | 23 | 334 | 28 | 333 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.95e-39 | 28 | 334 | 6 | 325 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 1.30e-35 | 81 | 228 | 128 | 301 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
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| 3.29e-35 | 27 | 334 | 7 | 331 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
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| 6.21e-30 | 23 | 229 | 5 | 247 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
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| 1.53e-27 | 71 | 228 | 111 | 295 | Structural insights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.74e-51 | 20 | 330 | 36 | 322 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
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| 2.38e-51 | 13 | 277 | 27 | 294 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
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| 2.38e-51 | 13 | 277 | 27 | 294 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
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| 2.94e-51 | 55 | 330 | 61 | 316 | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1 |
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| 2.94e-51 | 55 | 330 | 61 | 316 | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000232 | 0.999729 | CS pos: 17-18. Pr: 0.9865 |