You are browsing environment: FUNGIDB
CAZyme Information: OAG14323.1
You are here: Home > Sequence: OAG14323.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alternaria alternata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Pleosporaceae; Alternaria; Alternaria alternata | |||||||||||
| CAZyme ID | OAG14323.1 | |||||||||||
| CAZy Family | AA4 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 72 | 252 | 4.1e-99 | 0.989010989010989 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 226384 | PelB | 1.20e-54 | 56 | 315 | 69 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 214765 | Amb_all | 1.85e-52 | 85 | 253 | 18 | 190 | Amb_all domain. |
| 366158 | Pec_lyase_C | 4.98e-38 | 78 | 249 | 30 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.43e-185 | 1 | 317 | 1 | 317 | |
| 4.22e-167 | 1 | 317 | 1 | 315 | |
| 3.70e-126 | 26 | 315 | 38 | 326 | |
| 6.20e-124 | 26 | 315 | 151 | 439 | |
| 6.58e-122 | 26 | 315 | 38 | 326 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.39e-44 | 86 | 315 | 82 | 325 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
|
| 1.15e-30 | 85 | 250 | 82 | 277 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
|
| 2.79e-29 | 85 | 313 | 134 | 413 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
|
| 5.04e-26 | 83 | 313 | 127 | 396 | Structural insights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
|
| 6.35e-26 | 83 | 313 | 148 | 417 | Bacillus Subtilis Pectate Lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.68e-59 | 7 | 311 | 17 | 322 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
|
| 6.15e-56 | 78 | 314 | 88 | 314 | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1 |
|
| 6.15e-56 | 78 | 314 | 88 | 314 | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1 |
|
| 2.48e-54 | 24 | 311 | 37 | 326 | Pectate lyase B OS=Colletotrichum gloeosporioides OX=474922 GN=PLB PE=3 SV=1 |
|
| 5.31e-54 | 78 | 311 | 88 | 316 | Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000907 | 0.999084 | CS pos: 25-26. Pr: 0.9396 |