logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: NEUTE1DRAFT_86729-t26_1-p1

You are here: Home > Sequence: NEUTE1DRAFT_86729-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neurospora tetrasperma
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora tetrasperma
CAZyme ID NEUTE1DRAFT_86729-t26_1-p1
CAZy Family GT25
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
253 28400.50 5.2581
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_NtetraspermaFGSC2508 10380 510951 0 10380
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.14:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL20 25 253 6.7e-110 0.9956331877729258

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
404905 Polysacc_lyase 4.62e-78 27 240 2 213
Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.74e-189 1 253 1 253
5.54e-103 17 253 5 241
6.58e-102 20 253 19 252
2.08e-101 17 253 19 255
2.08e-101 17 253 19 255

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.78e-89 22 252 1 237
Chain A, Glucuronan lyase A [Trichoderma reesei]

Swiss-Prot Hits      help

NEUTE1DRAFT_86729-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000198 0.999756 CS pos: 21-22. Pr: 0.9728

TMHMM  Annotations      help

There is no transmembrane helices in NEUTE1DRAFT_86729-t26_1-p1.