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CAZyme Information: NEUDI_67556T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Neurospora discreta | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora discreta | |||||||||||
| CAZyme ID | NEUDI_67556T0-p1 | |||||||||||
| CAZy Family | GH71|GH71 | |||||||||||
| CAZyme Description | Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 24 | 644 | 2.2e-91 | 0.9964788732394366 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 1.15e-61 | 23 | 638 | 6 | 530 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 3.34e-57 | 25 | 638 | 6 | 528 | choline dehydrogenase; Validated |
| 398739 | GMC_oxred_C | 4.86e-34 | 497 | 637 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 1.48e-14 | 25 | 624 | 56 | 559 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 5.81e-10 | 258 | 394 | 121 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.32e-314 | 7 | 642 | 9 | 641 | |
| 1.35e-313 | 7 | 642 | 9 | 641 | |
| 1.37e-306 | 1 | 645 | 1 | 645 | |
| 1.37e-306 | 1 | 645 | 1 | 645 | |
| 1.37e-306 | 1 | 645 | 1 | 645 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.81e-44 | 18 | 638 | 1 | 557 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 2.24e-44 | 17 | 638 | 16 | 573 | Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis] |
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| 2.46e-44 | 18 | 638 | 1 | 557 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 2.46e-44 | 18 | 638 | 1 | 557 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 4.59e-44 | 25 | 638 | 8 | 557 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.36e-43 | 17 | 638 | 76 | 633 | Fatty acid photodecarboxylase, chloroplastic OS=Chlorella variabilis OX=554065 GN=FAP PE=1 SV=1 |
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| 1.00e-40 | 25 | 642 | 5 | 531 | Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1 |
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| 2.53e-40 | 24 | 638 | 6 | 532 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1 |
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| 3.44e-40 | 24 | 638 | 6 | 532 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1 |
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| 4.68e-40 | 24 | 638 | 6 | 532 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000304 | 0.999661 | CS pos: 19-20. Pr: 0.9778 |