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CAZyme Information: NEUDI_24601T0-p1

You are here: Home > Sequence: NEUDI_24601T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neurospora discreta
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora discreta
CAZyme ID NEUDI_24601T0-p1
CAZy Family GH47
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
219 NdisFGSC8579_SC006|CGC4 24333.84 6.5988
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_NdiscretaFGSC8579 10345 510953 397 9948
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in NEUDI_24601T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 38 217 2.5e-72 0.3757828810020877

CDD Domains      help

NEUDI_24601T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.06e-104 41 219 336 514
5.72e-89 41 219 316 494
7.81e-89 41 219 328 506
3.19e-87 41 219 327 505
1.81e-85 41 219 327 505

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.10e-40 42 217 923 1098
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
1.33e-38 42 217 923 1098
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
1.47e-06 145 211 734 800
Crystal structure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.29e-06 145 211 765 831
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000044 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in NEUDI_24601T0-p1.