CAZyme Information: NEUDI_126460T0-p1

Basic Information

• Species: Neurospora discreta
• Lineage: Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora discreta
• CAZyme ID: NEUDI_126460T0-p1
• CAZy Family: CE1
• CAZyme Description: Ribonuclease H

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
942		100728.15	5.4980

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_NdiscretaFGSC8579	10345	510953	397	9948

• Gene Location: location=NdisFGSC8579_SC006:955523-958607(-)

Full Sequence      

MRRHSFFPALIRLLPLVPVSGVVASPCHPHGPPKGDVSHAHGPGGGSHNGAGNGHGGGHG
GGGHGGPPGFPGNGSPDYPPFHGNGTHGGFPPYNGNGGSPITTTTITTTATDITTTTGIT
TTTTDTTATTGTTTSTASPTACSDYWLENIAHQGLAPYAIPGYRVFRSVKEFGARGDGIN
DDTDAINAAISSGNRCGPGCDGSTTRPALVYFPPGTYLVSRPIIDYYYTQVIGNARCRPV
IKASGNFTANWVIDSNPYQSDGNLAWGSTNVFWRQISNFIIDMTAAPEPSNPEAPGLAGI
HWPSSQATSLSNIEFRMSQDSATTQQGIFIESGSGGYLGDLTFNGGRFGLQVGNQQFTMR
NLVFNNVRTAIRQIWSWGWTYQGISINNCGVGFDFTSISNDPASLGQYQVGSITILDSSI
SNTPIGILIGSPNGADTRSVNNFIFENIALKNVAVAIRNLNNGGVDLVGTPVNMFIHAWG
RGNEYNTATAQDNTPSTPIPGTFTPFVRPASLLTPDGRYYARSKPLYSELPASAFLSARS
FGAVGNGQTDDTDALNQLFAAAAEQGKVAYIDHGQYIVTDTVFIPPGARITGESYPQIVS
AGPLFNDIANPKPVVQIGTIAGQPGSIEWSDTIVSTRGQQAGAIGIQYNLASAGSGQPSG
MWDVHVRIGGFRGSNLQLEQCPKTPEINAINPNCIAAFMSMHITALSSGLYMENCWFWVA
DHDIEDAANNSQITVYAGRGLLIESVVGQIWLVGTGVEHHQMYEYQLYNTNNIEMGQIQT
ETAYYQPNPDARFPFALDQRFHDPVFGPGEDGWGLRIVNSRGLRVYGAGLYSFFDNYDQS
MCIPGKNCQRNIFSLEGMNDVSVYNLNTVGTTYMATVDGTDIIPAADNAGMFVDSVANIC
DAVFSPFRAVNLLVISGLYYVLCHQREESRLIQHVYTLAKYL

Enzyme Prediction     

EC	3.2.1.58:16

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	134	897	3.1e-269	0.9918918918918919

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	2.14e-94	166	394	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	3.25e-04	535	655	1	128	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721	Pgu1	0.001	156	218	73	125	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
EAA30953.1|GH55	0.0	1	897	1	903
AEO63842.1|GH55	8.27e-312	141	897	210	963
AEO55693.1|GH55	1.89e-310	141	897	123	902
VBB80426.1|GH55	4.81e-299	142	897	72	823
CAP67037.1|GH55	8.40e-299	142	897	68	819

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	1.39e-222	141	897	2	751	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	3.64e-196	145	896	26	752	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P49426|EXG1_COCCA	2.85e-215	145	892	48	777	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	6.53e-199	140	897	38	871	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P53626|E13B_TRIHA	8.13e-40	205	850	95	701	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000407	0.999563	CS pos: 24-25. Pr: 0.9748

TMHMM  Annotations     

There is no transmembrane helices in NEUDI_126460T0-p1.