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CAZyme Information: NCU09024-t26_1-p1

You are here: Home > Sequence: NCU09024-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neurospora crassa
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa
CAZyme ID NCU09024-t26_1-p1
CAZy Family GT15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
624 CM002242|CGC10 67228.57 5.1017
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_NcrassaOR74A 10591 367110 833 9758
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in NCU09024-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 24 611 1.7e-69 0.5048543689320388

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 4.66e-48 262 603 195 526
choline dehydrogenase; Validated
225186 BetA 1.54e-47 43 603 24 528
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 5.92e-26 455 603 1 142
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 8.88e-22 261 600 215 568
Protein HOTHEAD
366272 GMC_oxred_N 2.18e-11 130 389 22 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.01e-306 2 610 1 612
2.01e-306 2 610 1 612
2.01e-306 2 610 1 612
3.40e-228 4 609 62 659
3.92e-204 1 610 4 614

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.22e-43 27 605 14 523
Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
3.22e-43 27 605 14 523
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
8.24e-43 27 605 14 523
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
5.99e-30 18 596 32 585
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
1.55e-29 27 609 6 528
Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688],6F97_B Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.24e-42 27 605 14 523
Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
4.93e-35 26 609 4 531
Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1
9.80e-34 12 605 34 573
Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
2.98e-33 26 608 50 624
Patulin synthase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=patE PE=1 SV=1
4.25e-33 25 609 44 594
Cyclase atC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=atC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000302 0.999691 CS pos: 16-17. Pr: 0.9785

TMHMM  Annotations      help

There is no transmembrane helices in NCU09024-t26_1-p1.