CAZyme Information: NCU07113-t26_1-p1

Basic Information

• Species: Neurospora crassa
• Lineage: Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa
• CAZyme ID: NCU07113-t26_1-p1
• CAZy Family: GH5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
637	CM002241|CGC15	71002.42	7.2535

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_NcrassaOR74A	10591	367110	833	9758

• Gene Location: location=CM002241:136247-138233(-)

Full Sequence      

MWPFAPSYPTVHAADIHNQTFDYIIVGGGTTGCVLASRLSESPNVSVLLLEKGRVHDNFL
SRIPLLSQNFEFPFLQSVRRDSDPIPAANGRRAALWTAEALGGATRINALLWTRGGAGGY
NQWSEDYGLEDWSWERVEPWFRRSEDVVRPRKPGLTLGCIPFVEEAAMRVGLPVGDGVND
PCANAQGCFVMDQTIDGKGQRMSAYKAWLPKEMVRERKGLKICTGVVASRLFFSKDGTRV
TGVRVREGDREYTVKARREVIVCSGTICTPQLLMLSGIGPRQHLESLKIPVLHDLPAVGQ
GLSDHTSVPIIMELPRKHTLHCLENAFVFLWHLLLYLFFGRGLLANGTTPRSIFVRIAAL
DENTMTVRHVDDSDQDTMDISPPRDIPDVEIMINPVNCLTVSVSGKSLFTWYTTLIQPYS
RGHVKVASDDPLADPKICYPMMTDARDRATMRKAVRFTMRLAEEFTNTGYPQEAPLTIAP
GMDLVYLDALYKTKTGLLQRFWTTKKPADEEPVPVPGKDPLPGATQLSASTSTNSESEMQ
QFQKPNWRTVTDKEIDAYASRVCVSSLHVSCTCRMSNNSREGVVNQMLKVHGIENLRIAD
ASVFPKIPSAHTMAPVVMMAERCAEFVKEEWENEKGK

Enzyme Prediction     

No EC number prediction in NCU07113-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	19	464	1e-111	0.8257042253521126

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	7.83e-102	16	624	1	528	choline dehydrogenase; Validated
225186	BetA	5.17e-89	17	630	4	536	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
366272	GMC_oxred_N	2.64e-37	86	306	12	217	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
398739	GMC_oxred_C	7.15e-31	418	623	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	1.14e-23	4	320	40	344	Protein HOTHEAD

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QYS92880.1|AA3_2	5.93e-202	1	631	1	615
CDP28838.1|AA3_2	6.94e-189	9	630	51	671
VBB80495.1|AA3_2	1.39e-188	8	630	50	671
UKZ47954.1|AA3	1.92e-172	6	635	1323	1918
QBZ58631.1|AA3_2	2.75e-165	2	635	3	660

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5NCC_A	6.94e-48	13	627	16	576	Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]
6YRU_AAA	7.49e-48	14	627	1	560	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
7AV4_AAA	8.29e-48	13	627	76	636	Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6ZH7_A	1.41e-47	19	627	6	560	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YS1_AAA	1.93e-47	14	627	1	560	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q2T6D0|BETA_BURTA	8.57e-65	19	628	4	533	Oxygen-dependent choline dehydrogenase OS=Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264) OX=271848 GN=betA PE=3 SV=1
sp|Q3JLL7|BETA_BURP1	2.30e-63	19	628	4	533	Oxygen-dependent choline dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) OX=320372 GN=betA PE=3 SV=1
sp|A9AMZ9|BETA_BURM1	8.73e-63	19	628	4	533	Oxygen-dependent choline dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=betA PE=3 SV=1
sp|Q63KK7|BETA_BURPS	1.19e-62	19	629	4	534	Oxygen-dependent choline dehydrogenase OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=betA PE=3 SV=1
sp|Q62CH8|BETA_BURMA	3.18e-62	19	628	4	533	Oxygen-dependent choline dehydrogenase OS=Burkholderia mallei (strain ATCC 23344) OX=243160 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999743	0.000300

TMHMM  Annotations     

There is no transmembrane helices in NCU07113-t26_1-p1.