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CAZyme Information: NCU06326-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Neurospora crassa | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa | |||||||||||
| CAZyme ID | NCU06326-t26_1-p1 | |||||||||||
| CAZy Family | GH31 | |||||||||||
| CAZyme Description | pectate lyase 1 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 83 | 263 | 3.4e-91 | 0.994475138121547 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 1.35e-61 | 87 | 266 | 5 | 189 | Amb_all domain. |
| 226384 | PelB | 6.37e-51 | 71 | 297 | 68 | 309 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.27e-37 | 67 | 263 | 5 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.25e-166 | 5 | 331 | 4 | 330 | |
| 5.85e-154 | 1 | 331 | 1 | 333 | |
| 4.45e-153 | 5 | 331 | 4 | 331 | |
| 8.97e-153 | 5 | 331 | 4 | 331 | |
| 8.97e-153 | 5 | 331 | 4 | 331 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.74e-45 | 43 | 326 | 6 | 321 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 1.13e-33 | 34 | 241 | 1 | 246 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
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| 2.98e-26 | 50 | 263 | 20 | 226 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
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| 2.38e-25 | 89 | 247 | 118 | 301 | Structural insights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
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| 2.97e-25 | 89 | 247 | 139 | 322 | Bacillus Subtilis Pectate Lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.48e-103 | 12 | 326 | 11 | 323 | Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1 |
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| 9.18e-103 | 7 | 326 | 3 | 323 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
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| 9.18e-103 | 7 | 326 | 3 | 323 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
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| 1.26e-102 | 8 | 326 | 5 | 322 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
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| 8.17e-98 | 31 | 331 | 29 | 323 | Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000252 | 0.999749 | CS pos: 33-34. Pr: 0.2490 |