You are browsing environment: FUNGIDB
CAZyme Information: NCU05852-t26_1-p1
You are here: Home > Sequence: NCU05852-t26_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Neurospora crassa | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa | |||||||||||
| CAZyme ID | NCU05852-t26_1-p1 | |||||||||||
| CAZy Family | GH20 | |||||||||||
| CAZyme Description | glucuronan lyase-1 | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.14:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL20 | 25 | 253 | 3.4e-111 | 0.9956331877729258 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 404905 | Polysacc_lyase | 1.95e-79 | 27 | 240 | 2 | 213 | Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.18e-193 | 1 | 253 | 1 | 253 | |
| 4.78e-104 | 17 | 253 | 5 | 241 | |
| 2.82e-103 | 20 | 253 | 19 | 252 | |
| 1.27e-102 | 10 | 253 | 13 | 255 | |
| 1.54e-102 | 3 | 253 | 40 | 292 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.64e-90 | 22 | 252 | 1 | 237 | Chain A, Glucuronan lyase A [Trichoderma reesei] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000215 | 0.999767 | CS pos: 21-22. Pr: 0.9746 |