CAZyme Information: NCU04997-t26_1-p1

Basic Information

• Species: Neurospora crassa
• Lineage: Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa
• CAZyme ID: NCU04997-t26_1-p1
• CAZy Family: GH16
• CAZyme Description: xylanase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
431	CM002241|CGC6	45899.51	7.8243

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_NcrassaOR74A	10591	367110	833	9758

• Gene Location: location=CM002241:4144785-4146212(+)

Full Sequence      

MHLPTVLSVIFAAAGVTAQLNDLAVAAGLKYFGTAGQEGTITSDTTYRNIINNVHEFGQL
TPENGMKWDATEGQPGKFTFQSGDIVAGVAKSNGQLLRCHTLVWYSQLPSWVSNGSWNRN
TLQSVIESHISNVMGHYKGQCYAWDVVNEAISDDAQGNYRDSIFFKTFKTDYFPIAFNAA
KKADPNAKLYYNDYNLEYNGAKTERALELVKLIKAAGAPIDGVGFQAHMTVGGTPSRSAM
ATLLKRFTALGVEVAYTELDIAHKNQPSSSSVQAQQATDYANMVGSCVDVDGCVGVTIWG
FIDKYNWIQNGNAAIFDSSFNKKPAYSAISSVLAAAATKAPTPAKNANSPPAVHTTLRTA
IATAPACEATATAPKATAAPAAQPAKPATGSSTGAQQPRWAQCGGNGYTGPTACQAPYTC
KVQNPWYSQCL

Enzyme Prediction     

EC	3.2.1.8:31

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH10	21	330	2.5e-100	0.9834983498349835

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395262	Glyco_hydro_10	1.02e-133	20	329	1	308	Glycosyl hydrolase family 10.
214750	Glyco_10	1.14e-117	66	329	1	263	Glycosyl hydrolase family 10.
226217	XynA	9.66e-88	7	333	12	341	Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
197593	fCBD	6.33e-15	398	431	1	34	Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595	CBM_1	4.03e-14	399	427	1	29	Fungal cellulose binding domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
VBB81502.1|CBM1|GH10	1.19e-173	1	431	1	418
CDP29703.1|CBM1|GH10	1.19e-173	1	431	1	418
CAP62292.1|CBM1|GH10	1.19e-173	1	431	1	418
AHE13928.1|CBM1|GH10	9.70e-173	1	431	1	418
AEO67457.1|CBM1|GH10	1.20e-172	1	431	1	414

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q8M_A	1.13e-121	5	431	14	406	GH10 endo-xylanase [Aspergillus aculeatus ATCC 16872],6Q8M_B GH10 endo-xylanase [Aspergillus aculeatus ATCC 16872],6Q8N_A GH10 endo-xylanase in complex with xylobiose epoxide inhibitor [Aspergillus aculeatus ATCC 16872],6Q8N_B GH10 endo-xylanase in complex with xylobiose epoxide inhibitor [Aspergillus aculeatus ATCC 16872]
6JDT_A	1.06e-118	18	335	1	319	Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5 [Aspergillus fumigatus Z5],6JDT_B Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5 [Aspergillus fumigatus Z5],6JDY_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 120 minutes [Aspergillus fumigatus Z5],6JDY_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 120 minutes [Aspergillus fumigatus Z5],6JDZ_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 20 minutes [Aspergillus fumigatus Z5],6JDZ_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 20 minutes [Aspergillus fumigatus Z5],6JE0_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 30 minutes [Aspergillus fumigatus Z5],6JE0_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 30 minutes [Aspergillus fumigatus Z5],6JE1_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 40 minutes [Aspergillus fumigatus Z5],6JE1_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 40 minutes [Aspergillus fumigatus Z5],6JE2_A Ligand complex structure of GH10 family xylanase XynAF1, soaking for 80 minutes [Aspergillus fumigatus Z5],6JE2_B Ligand complex structure of GH10 family xylanase XynAF1, soaking for 80 minutes [Aspergillus fumigatus Z5]
3U7B_A	5.45e-105	12	326	1	317	A new crystal structure of a Fusarium oxysporum GH10 xylanase reveals the presence of an extended loop on top of the catalytic cleft [Fusarium oxysporum],3U7B_B A new crystal structure of a Fusarium oxysporum GH10 xylanase reveals the presence of an extended loop on top of the catalytic cleft [Fusarium oxysporum],3U7B_C A new crystal structure of a Fusarium oxysporum GH10 xylanase reveals the presence of an extended loop on top of the catalytic cleft [Fusarium oxysporum],3U7B_D A new crystal structure of a Fusarium oxysporum GH10 xylanase reveals the presence of an extended loop on top of the catalytic cleft [Fusarium oxysporum],3U7B_E A new crystal structure of a Fusarium oxysporum GH10 xylanase reveals the presence of an extended loop on top of the catalytic cleft [Fusarium oxysporum]
3WUF_A	6.41e-86	17	333	2	312	The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) from Streptomyces sp. 9 [Streptomyces sp.],3WUG_A The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) with xylobiose from Streptomyces sp. 9 [Streptomyces sp.]
1B30_A	9.02e-86	28	333	14	302	XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE) [Penicillium simplicissimum],1B31_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT [Penicillium simplicissimum],1B3V_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOSE [Penicillium simplicissimum],1B3W_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE [Penicillium simplicissimum],1B3X_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTRIOSE [Penicillium simplicissimum],1B3Y_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTETRAOSE [Penicillium simplicissimum],1B3Z_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOPENTAOSE [Penicillium simplicissimum],1BG4_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM [Penicillium simplicissimum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P79046|XYN1_HUMGT	5.66e-160	10	431	11	429	Endo-1,4-beta-xylanase 1 OS=Humicola grisea var. thermoidea OX=5528 GN=xyn1 PE=2 SV=1
sp|Q8J1Y4|XYN5_MAGGR	2.91e-126	20	361	38	377	Endo-1,4-beta-xylanase 5 OS=Magnaporthe grisea OX=148305 GN=XYL5 PE=3 SV=1
sp|G4MLU0|XYN5_MAGO7	2.91e-126	20	361	38	377	Endo-1,4-beta-xylanase 5 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL5 PE=3 SV=1
sp|Q5ZNB1|XYND_TALFU	1.26e-117	18	431	19	407	Endo-1,4-beta-xylanase D OS=Talaromyces funiculosus OX=28572 GN=xynD PE=1 SV=1
sp|Q9HEZ1|XYNA_PHACH	3.61e-109	17	329	91	402	Endo-1,4-beta-xylanase A OS=Phanerodontia chrysosporium OX=2822231 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000235	0.999730	CS pos: 18-19. Pr: 0.9736

TMHMM  Annotations     

There is no transmembrane helices in NCU04997-t26_1-p1.