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CAZyme Information: NCU04947-t26_1-p1

You are here: Home > Sequence: NCU04947-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neurospora crassa
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa
CAZyme ID NCU04947-t26_1-p1
CAZy Family GH16
CAZyme Description LysM domain-containing protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1315 141427.67 5.6242
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_NcrassaOR74A 10591 367110 833 9758
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in NCU04947-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 178 935 4.8e-242 0.9783783783783784

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
403800 Pectate_lyase_3 3.28e-75 218 448 1 213
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800 Pectate_lyase_3 1.77e-06 580 643 5 74
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721 Pgu1 5.73e-04 220 271 84 125
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1315 1 1315
0.0 1 1301 326 1635
0.0 10 1303 332 1644
0.0 84 1309 446 1672
1.90e-298 72 954 49 906

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.94e-168 165 944 2 757
Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]
6.78e-157 188 935 6 744
Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.04e-147 187 928 42 856
Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
9.03e-147 179 887 39 721
Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
5.48e-51 234 908 71 719
Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000051 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in NCU04947-t26_1-p1.