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CAZyme Information: NCU02654-t26_1-p1

You are here: Home > Sequence: NCU02654-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Neurospora crassa
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Neurospora; Neurospora crassa
CAZyme ID NCU02654-t26_1-p1
CAZy Family CBM52
CAZyme Description glycosyl hydrolase family 88
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
375 42625.69 4.7388
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_NcrassaOR74A 10591 367110 833 9758
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in NCU02654-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 47 371 3.5e-104 0.9728915662650602

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226678 YesR 1.44e-102 23 373 7 352
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
400034 Glyco_hydro_88 3.55e-90 26 374 1 343
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.53e-287 1 375 1 375
2.86e-213 1 375 1 375
6.71e-212 1 375 1 375
3.47e-211 1 375 1 372
3.47e-211 1 375 1 372

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.79e-202 10 375 5 373
Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126],4XUV_B Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126]
7.81e-157 8 374 22 381
Chain A, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
2.49e-155 12 374 25 380
Chain A, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
4.14e-17 50 331 37 320
Structure of Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
1.72e-16 50 331 27 310
Chain A, Putative glycosyl hydrolase yteR [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.63e-45 52 369 29 334
Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1
2.13e-16 50 331 37 320
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
7.53e-13 169 350 10 199
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
7.53e-13 169 350 10 199
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1
1.46e-09 154 332 201 375
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000053 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in NCU02654-t26_1-p1.