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CAZyme Information: MELLADRAFT_94062-t26_1-p1

You are here: Home > Sequence: MELLADRAFT_94062-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Melampsora larici-populina
Lineage Basidiomycota; Pucciniomycetes; ; Melampsoraceae; Melampsora; Melampsora larici-populina
CAZyme ID MELLADRAFT_94062-t26_1-p1
CAZy Family GT8
CAZyme Description family 12 glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
314 GL883154|CGC2 35951.06 10.1475
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Mlarici-populina98AG31 16380 747676 8 16372
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MELLADRAFT_94062-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 132 275 7e-25 0.9487179487179487

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 1.48e-06 134 279 60 204
Glycosyl hydrolase family 12.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.88e-59 70 282 45 264
4.88e-59 70 282 45 264
9.74e-59 70 282 45 264
2.12e-56 70 282 49 268
2.71e-56 70 282 49 268

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.82e-18 73 278 19 218
Crystal structure of xeg-edgp [Aspergillus aculeatus],3VLB_D Crystal structure of xeg-edgp [Aspergillus aculeatus]
3.21e-18 73 278 26 225
Crystal structure of XEG [Aspergillus aculeatus],3VL9_A Crystal structure of xeg-xyloglucan [Aspergillus aculeatus],3VL9_B Crystal structure of xeg-xyloglucan [Aspergillus aculeatus]
1.14e-14 73 272 39 230
Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus],4NPR_B Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus]
5.63e-14 73 242 17 180
The Humicola grisea Cel12A Enzyme Structure at 1.2 A Resolution [Trichocladium griseum],1UU4_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH CELLOBIOSE [Trichocladium griseum],1UU5_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A SOAKED WITH CELLOTETRAOSE [Trichocladium griseum],1UU6_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH A SOAKED CELLOPENTAOSE [Trichocladium griseum],1W2U_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH A SOAKED THIO CELLOTETRAOSE [Trichocladium griseum]
1.80e-13 117 278 55 212
Chain A, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OLQ_B Chain B, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.94e-17 73 278 35 234
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus aculeatus OX=5053 GN=xgeA PE=1 SV=1
8.24e-15 73 279 33 235
Inactive glycoside hydrolase XLP1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XLP1 PE=1 SV=1
3.04e-14 73 270 36 226
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger OX=5061 GN=xgeA PE=1 SV=1
3.98e-14 73 272 34 225
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xgeA PE=3 SV=1
4.17e-14 73 278 34 237
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=xgeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000256 0.999729 CS pos: 24-25. Pr: 0.9775

TMHMM  Annotations      help

There is no transmembrane helices in MELLADRAFT_94062-t26_1-p1.