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CAZyme Information: MELLADRAFT_90740-t26_1-p1

You are here: Home > Sequence: MELLADRAFT_90740-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Melampsora larici-populina
Lineage Basidiomycota; Pucciniomycetes; ; Melampsoraceae; Melampsora; Melampsora larici-populina
CAZyme ID MELLADRAFT_90740-t26_1-p1
CAZy Family GT4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
436 48967.25 5.8652
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Mlarici-populina98AG31 16380 747676 8 16372
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MELLADRAFT_90740-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 133 393 7.6e-27 0.7680722891566265

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
400034 Glyco_hydro_88 1.07e-11 135 373 87 315
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
226678 YesR 4.22e-11 107 384 69 340
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.48e-58 30 400 34 383
3.35e-56 23 394 17 394
3.43e-56 44 396 7 329
7.64e-56 40 396 37 364
9.02e-56 23 394 30 407

PDB Hits      help

MELLADRAFT_90740-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

MELLADRAFT_90740-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000639 0.999321 CS pos: 20-21. Pr: 0.9707

TMHMM  Annotations      help

There is no transmembrane helices in MELLADRAFT_90740-t26_1-p1.