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CAZyme Information: MELLADRAFT_88682-t26_1-p1

You are here: Home > Sequence: MELLADRAFT_88682-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Melampsora larici-populina
Lineage Basidiomycota; Pucciniomycetes; ; Melampsoraceae; Melampsora; Melampsora larici-populina
CAZyme ID MELLADRAFT_88682-t26_1-p1
CAZy Family GT2
CAZyme Description family 12 glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
314 GL883117|CGC1 35601.57 9.6040
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Mlarici-populina98AG31 16380 747676 8 16372
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MELLADRAFT_88682-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 132 270 1.5e-23 0.8846153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 3.76e-09 120 270 47 192
Glycosyl hydrolase family 12.
235746 PRK06215 0.003 174 220 133 176
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.46e-59 35 285 10 267
3.46e-59 35 285 10 267
6.90e-59 35 285 10 267
2.95e-55 61 282 38 268
2.95e-55 61 282 38 268

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.64e-19 54 272 8 216
Crystal structure of XEG [Aspergillus aculeatus],3VL9_A Crystal structure of xeg-xyloglucan [Aspergillus aculeatus],3VL9_B Crystal structure of xeg-xyloglucan [Aspergillus aculeatus]
1.07e-18 60 272 7 209
Crystal structure of xeg-edgp [Aspergillus aculeatus],3VLB_D Crystal structure of xeg-edgp [Aspergillus aculeatus]
1.02e-13 73 272 39 230
Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus],4NPR_B Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus]
1.97e-13 73 242 17 180
The Humicola grisea Cel12A Enzyme Structure at 1.2 A Resolution [Trichocladium griseum],1UU4_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH CELLOBIOSE [Trichocladium griseum],1UU5_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A SOAKED WITH CELLOTETRAOSE [Trichocladium griseum],1UU6_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH A SOAKED CELLOPENTAOSE [Trichocladium griseum],1W2U_A X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH A SOAKED THIO CELLOTETRAOSE [Trichocladium griseum]
3.36e-13 120 278 58 212
Chain A, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OLQ_B Chain B, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.82e-18 54 272 17 225
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus aculeatus OX=5053 GN=xgeA PE=1 SV=1
9.27e-16 54 279 18 234
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xgeA PE=3 SV=1
9.27e-16 54 279 18 234
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xgeA PE=3 SV=1
1.78e-15 54 270 18 226
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger OX=5061 GN=xgeA PE=1 SV=1
2.44e-15 54 270 18 226
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xgeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.224758 0.775222 CS pos: 26-27. Pr: 0.7401

TMHMM  Annotations      help

There is no transmembrane helices in MELLADRAFT_88682-t26_1-p1.