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CAZyme Information: MELLADRAFT_78608-t26_1-p1

You are here: Home > Sequence: MELLADRAFT_78608-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Melampsora larici-populina
Lineage Basidiomycota; Pucciniomycetes; ; Melampsoraceae; Melampsora; Melampsora larici-populina
CAZyme ID MELLADRAFT_78608-t26_1-p1
CAZy Family GH7
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
448 47644.80 8.6682
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Mlarici-populina98AG31 16380 747676 8 16372
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MELLADRAFT_78608-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA9 83 251 3.9e-27 0.7318181818181818

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
410622 LPMO_AA9 7.88e-29 97 265 48 216
lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 9 (AA9). AA9 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs) involved in the cleavage of cellulose chains with oxidation of carbons C1 and/or C4 and C6. Activities include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54) and lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56). The family used to be called GH61 because weak endoglucanase activity had been demonstrated in some family members.
397484 Glyco_hydro_61 9.15e-21 107 249 58 193
Glycosyl hydrolase family 61. Although weak endoglucanase activity has been demonstrated in several members of this family, they lack the clustered conserved catalytic acidic amino acids present in most glycoside hydrolases. Many members of this family lack measurable cellulase activity on their own, but enhance the activity of other cellulolytic enzymes. They are therefore unlikely to be true glycoside hydrolases. The subsrate-binding surface of this family is a flat Ig-like fold.
399033 CFEM 8.67e-08 348 414 5 66
CFEM domain. This fungal specific cysteine rich domain is found in some proteins with proposed roles in fungal pathogenesis. The structure of the CFEM domain containing protein 'Surface antigen protein 2' from Candida albicans has been solved.
128986 CFEM 3.76e-06 348 414 5 65
eight cysteine-containing domain present in fungal extracellular membrane proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.17e-77 32 413 28 388
9.34e-19 4 253 3 232
4.56e-15 98 251 79 227
5.77e-15 99 251 51 195
2.14e-14 111 271 82 230

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.56e-10 126 266 106 248
Chain A, Cel61b [Trichoderma reesei],2VTC_B Chain B, Cel61b [Trichoderma reesei]
3.26e-07 129 264 78 219
Chain A, LPMO9F [Malbranchea cinnamomea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.72e-11 105 253 90 228
Cellulose-growth-specific protein OS=Agaricus bisporus OX=5341 GN=cel1 PE=3 SV=1
1.19e-10 28 277 31 255
Polysaccharide monooxygenase Cel61a OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Cel61a PE=1 SV=1
4.40e-09 126 266 106 248
Endoglucanase-7 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=cel61b PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.008157 0.991791 CS pos: 26-27. Pr: 0.9567

TMHMM  Annotations      help

There is no transmembrane helices in MELLADRAFT_78608-t26_1-p1.