CAZyme Information: MELLADRAFT_62685-t26_1-p1

Basic Information

• Species: Melampsora larici-populina
• Lineage: Basidiomycota; Pucciniomycetes; ; Melampsoraceae; Melampsora; Melampsora larici-populina
• CAZyme ID: MELLADRAFT_62685-t26_1-p1
• CAZy Family: GH47|GH47
• CAZyme Description: family 5 glycoside hydrolase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
574	GL883104|CGC1	64116.91	7.2754

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Mlarici-populina98AG31	16380	747676	8	16372

• Gene Location: location=GL883104:1274913-1278080(-)

Full Sequence      

MSIPHKGTFSSLLTSLINLLSFQIFLTSAQIVPLQLNDLSNVLPKPAVPQRGVSSVTPQK
RGGFVSTKNGHFYLGENLFDFRGFNGPTLLDVANKVFGLSKGPEVAHITGWDNSTQDWIY
NEETWRQMDNALAIAAEHGVKIIMPIINQDYGSSDTDWVGNFIDLIRYRFNITEYTTAQV
SVDWFVNSSIREDFKKIIKKLLTRVNTVNGRLYGRDDTFLAFETGNEMNWAEVFVTSNST
NGTTNGNSTGAVNATDANATINGTVTFNHTRPAPAEWTIDIAKYIKQYAPHTLVMDGSYS
RNPQDTWPEETLKSPYVDIFSYHLYNNEASFEKAYKTFTCAGALAWSLRPHAESNGFITH
SESDSVFSYHVPGWTNSTASNFDPREAGIVALTYKSSFEILNKPVAPYPVPASPLPYFGT
NGTHIGITWKGAAWAQSYQVWASESDGGGFIMVANEIHDNVESGDLFVPIDVKSPKSPLQ
IPYKPQIHYPEPMPIWRDTKWSNQPSRNPNEVQKLTKRHTISIPRKHSKLTKRQNHPQSV
HSRTKGGWFIVRGISVDGLPGPFSEPTFIPSTYS

Enzyme Prediction     

EC	3.2.1.78:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH5	104	230	2e-23	0.43359375

CDD Domains     

MELLADRAFT_62685-t26_1-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALL41339.1|GH5	1.08e-110	104	418	3	341
CDR43041.1|GH5	2.55e-75	64	470	49	479
ALL40758.1|GH5	4.05e-64	293	566	1	318
ABR27262.1|GH5_41	6.54e-28	120	459	105	410
ATX82280.1|GH5_41	2.30e-27	120	461	110	411

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RH9_A	1.57e-06	64	227	6	178	Chain A, endo-beta-mannanase [Solanum lycopersicum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|O48540|MAN1_SOLLC	1.81e-09	59	227	22	199	Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum OX=4081 GN=MAN1 PE=1 SV=2
sp|Q6YM50|MAN5_SOLLC	1.93e-09	63	227	38	211	Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum OX=4081 GN=MAN5 PE=2 SV=1
sp|Q9FZ03|MAN2_SOLLC	1.93e-09	63	227	38	211	Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum OX=4081 GN=MAN2 PE=2 SV=2
sp|Q0JJD4|MAN2_ORYSJ	6.18e-08	38	227	30	227	Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAN2 PE=2 SV=2
sp|Q9FJZ3|MAN7_ARATH	7.91e-08	62	227	29	203	Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana OX=3702 GN=MAN7 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.120316	0.879662	CS pos: 29-30. Pr: 0.8242

TMHMM  Annotations     

There is no transmembrane helices in MELLADRAFT_62685-t26_1-p1.