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CAZyme Information: MELLADRAFT_108110-t26_1-p1

You are here: Home > Sequence: MELLADRAFT_108110-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Melampsora larici-populina
Lineage Basidiomycota; Pucciniomycetes; ; Melampsoraceae; Melampsora; Melampsora larici-populina
CAZyme ID MELLADRAFT_108110-t26_1-p1
CAZy Family AA3
CAZyme Description family 1 polysaccharide lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
353 37019.69 8.8573
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Mlarici-populina98AG31 16380 747676 8 16372
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 138 246 1e-35 0.5668449197860963

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 4.19e-17 138 261 45 190
Amb_all domain.
226384 PelB 1.27e-05 138 263 130 279
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.76e-62 13 352 11 380
2.02e-52 13 352 11 380
1.08e-51 19 352 17 379
1.19e-51 19 352 18 383
4.49e-50 23 352 21 379

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.04e-44 27 299 9 313
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
1.04e-44 27 299 9 313
Pectin Lyase A [Aspergillus niger]
3.00e-43 27 306 9 321
Pectin Lyase B [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.32e-52 23 353 25 381
Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1
1.33e-47 23 301 26 338
Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1
1.33e-47 23 301 26 338
Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1
1.47e-46 23 299 25 335
Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2
1.47e-46 23 299 25 335
Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000056 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in MELLADRAFT_108110-t26_1-p1.