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CAZyme Information: M747DRAFT_316391-t43_1-p1

You are here: Home > Sequence: M747DRAFT_316391-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID M747DRAFT_316391-t43_1-p1
CAZy Family GH35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1206 KZ851923|CGC2 134167.59 5.0587
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerATCC13496 12468 1353008 274 12194
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in M747DRAFT_316391-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 35 742 2.4e-51 0.7621359223300971

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398723 RdRP 1.36e-84 779 1016 338 554
RNA dependent RNA polymerase. This family of proteins are eukaryotic RNA dependent RNA polymerases. These proteins are involved in post transcriptional gene silencing where they are thought to amplify dsRNA templates.
407266 Glyco_hydro_106 7.59e-06 178 634 337 764
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 13 779 44 812
0.0 28 767 34 791
0.0 28 767 34 791
0.0 28 767 36 793
0.0 28 768 30 796

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.05e-29 797 1016 777 964
Chain M, RNA-dependent RNA polymerase 2 [Arabidopsis thaliana],7EU1_M Chain M, RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
4.18e-29 797 1016 777 964
Chain A, RNA-dependent RNA polymerase 2 [Arabidopsis thaliana],7RQS_A Chain A, RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
2.42e-08 799 878 579 653
RNA dependent RNA polymerase QDE-1 from Thielavia terrestris [Thermothielavioides terrestris],5FSW_B RNA dependent RNA polymerase QDE-1 from Thielavia terrestris [Thermothielavioides terrestris],5FSW_C RNA dependent RNA polymerase QDE-1 from Thielavia terrestris [Thermothielavioides terrestris],5FSW_D RNA dependent RNA polymerase QDE-1 from Thielavia terrestris [Thermothielavioides terrestris]
4.14e-08 799 891 578 663
Structure of the RNAi polymerase from Neurospora crassa [Neurospora crassa],2J7N_B Structure of the RNAi polymerase from Neurospora crassa [Neurospora crassa],2J7O_A Structure Of The Rnai Polymerase From Neurospora Crassa [Neurospora crassa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.06e-29 797 965 773 937
Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1
2.08e-28 797 1016 777 964
RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1
1.09e-25 797 1112 746 1012
RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1
1.79e-24 797 1034 836 1041
Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1
3.92e-24 797 1016 378 563
Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.993044 0.006973

TMHMM  Annotations      help

There is no transmembrane helices in M747DRAFT_316391-t43_1-p1.