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CAZyme Information: M747DRAFT_240324-t43_1-p1

You are here: Home > Sequence: M747DRAFT_240324-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID M747DRAFT_240324-t43_1-p1
CAZy Family AA3
CAZyme Description polygalacturonase E precursor pgaE
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 39630.91 3.7074
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerATCC13496 12468 1353008 274 12194
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 58 374 2.7e-74 0.9753846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 4.81e-128 63 378 3 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
227721 Pgu1 1.41e-24 97 335 183 456
Polygalacturonase [Carbohydrate transport and metabolism].
178580 PLN03003 6.53e-24 120 367 120 364
Probable polygalacturonase At3g15720
215540 PLN03010 1.32e-22 101 377 124 394
polygalacturonase
177865 PLN02218 2.02e-21 112 374 157 422
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.62e-271 1 378 1 378
6.29e-269 1 378 1 378
6.29e-269 1 378 1 378
2.10e-267 1 378 1 378
5.50e-200 12 378 12 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.84e-188 40 378 1 339
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]
1.21e-159 36 378 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
6.96e-159 36 378 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
6.07e-158 42 378 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.67e-142 41 378 1 336
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.21e-272 1 378 1 378
Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1
3.74e-268 1 378 1 378
Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1
5.36e-198 12 378 12 382
Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1
7.34e-198 7 378 6 381
Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1
1.36e-194 10 378 11 378
Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000224 0.999745 CS pos: 19-20. Pr: 0.9764

TMHMM  Annotations      help

There is no transmembrane helices in M747DRAFT_240324-t43_1-p1.