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CAZyme Information: KIX04498.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rhinocladiella mackenziei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Rhinocladiella; Rhinocladiella mackenziei | |||||||||||
| CAZyme ID | KIX04498.1 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | Rhinocladiella mackenziei CBS 650.93 unplaced genomic scaffold supercont1.4, whole genome shotgun sequence [Source:UniProtKB/TrEMBL;Acc:A0A0D2H273] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.58:16 | 3.2.1.58:16 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH55 | 451 | 867 | 2.3e-165 | 0.55 |
| GH55 | 28 | 378 | 7.7e-133 | 0.4648648648648649 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 403800 | Pectate_lyase_3 | 1.92e-92 | 56 | 281 | 1 | 213 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| 403800 | Pectate_lyase_3 | 1.92e-09 | 503 | 570 | 1 | 73 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| 227721 | Pgu1 | 0.002 | 58 | 113 | 84 | 129 | Polygalacturonase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 6 | 868 | 16 | 945 | |
| 0.0 | 7 | 868 | 615 | 1514 | |
| 0.0 | 7 | 868 | 6 | 920 | |
| 0.0 | 16 | 868 | 67 | 997 | |
| 0.0 | 6 | 868 | 18 | 948 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.35e-303 | 32 | 869 | 4 | 755 | Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila] |
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| 6.64e-207 | 34 | 867 | 26 | 755 | Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.47e-318 | 14 | 867 | 25 | 873 | Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1 |
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| 1.23e-187 | 30 | 864 | 44 | 781 | Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1 |
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| 2.49e-43 | 14 | 848 | 17 | 738 | Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000330 | 0.999658 | CS pos: 16-17. Pr: 0.9694 |