CAZyme Information: KGB74556.1

Basic Information

• Species: Cryptococcus gattii VGII
• Lineage: Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGII
• CAZyme ID: KGB74556.1
• CAZy Family: AA2
• CAZyme Description: Alginate_lyase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A095CZ26]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
470		52534.57	5.2227

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CgattiiVGIIR265	6705	294750	281	6424

• Gene Location: location=CP025762:405958-407647(-)

Full Sequence      

MFSLGTFLTTTICLLSHLPTSFAFGVQNYPNLFFAASTVVSNQWFSSVDSRWAREMSEYW
AQTLIQYGPWSVTNKSYTAKSGDKKDYLSWAVYHWPDCSNVQNTTELTEEEVWDECDYVV
RDGKVNPDIELVKDKQALQNMSNSVYLSAMAYLHTNDSQYTTHINHALHTFFINNDTRMN
PNLNYAQVIRGPGDQMGRHTGVLDLACMAKIVSGVQVMRSIKPAEWQQETETGIMQWASE
QLNWLYTSEQGLGELNATNNHGTFAVNQVCALNVLLNQNDACVTALEDFYNGIYLDQIAS
NGDQPLESARTRPYHYRAFNLMALVTNAQFGDFVGLSPSAWERRSAANTTIVDALHFAML
QNYTASNELTQSRALNPVVAAISAKYGDPDNKYANFLKSSDPYFPGQPWFALNEGLSDAG
IKQGLLETTYGPVPSQPTLGAGSPDDPNHQRKRNWKSRGTGWPTVAPKAP

Enzyme Prediction     

No EC number prediction in KGB74556.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL38	72	359	9e-89	0.96415770609319

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
398861	Alginate_lyase	6.42e-74	71	359	1	265	Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
KGB74556.1|PL38	0.0	1	470	1	470
ADV20174.1|PL38	0.0	1	470	1	470
AAW40805.1|PL38	1.14e-309	1	470	3	472
AFR92301.1|PL38	1.50e-298	1	470	3	472
AUB21714.1|PL38	1.50e-298	1	470	3	472

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3NFV_A	1.32e-26	65	357	41	316	Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits     

KGB74556.1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.083538	0.916417	CS pos: 23-24. Pr: 0.8780

TMHMM  Annotations     

There is no transmembrane helices in KGB74556.1.