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CAZyme Information: KEF60468.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Exophiala aquamarina | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala aquamarina | |||||||||||
| CAZyme ID | KEF60468.1 | |||||||||||
| CAZy Family | GH76 | |||||||||||
| CAZyme Description | GMC_OxRdtase_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A072PMA1] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 14 | 531 | 1.6e-137 | 0.9964788732394366 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 3.18e-113 | 14 | 528 | 5 | 531 | choline dehydrogenase; Validated |
| 225186 | BetA | 3.07e-112 | 14 | 535 | 7 | 540 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 2.37e-43 | 384 | 524 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 5.47e-29 | 6 | 521 | 47 | 569 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 9.37e-27 | 15 | 308 | 1 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.92e-227 | 6 | 533 | 5 | 534 | |
| 2.28e-225 | 1 | 541 | 1 | 542 | |
| 6.11e-223 | 1 | 541 | 1 | 542 | |
| 3.51e-222 | 1 | 541 | 1 | 542 | |
| 3.51e-222 | 1 | 541 | 1 | 542 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.82e-96 | 4 | 528 | 3 | 526 | Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
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| 5.59e-96 | 4 | 528 | 3 | 526 | Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
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| 5.59e-96 | 4 | 528 | 3 | 526 | Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
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| 6.94e-53 | 8 | 532 | 1 | 564 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 3.51e-52 | 14 | 532 | 7 | 564 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.45e-95 | 4 | 528 | 3 | 526 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
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| 3.64e-69 | 15 | 528 | 5 | 530 | Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1 |
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| 6.17e-68 | 15 | 528 | 5 | 530 | Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1 |
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| 1.68e-67 | 15 | 528 | 5 | 530 | Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1 |
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| 5.36e-67 | 15 | 541 | 2 | 540 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000043 | 0.000008 |