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CAZyme Information: KEF57685.1

You are here: Home > Sequence: KEF57685.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala aquamarina
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala aquamarina
CAZyme ID KEF57685.1
CAZy Family GH3
CAZyme Description choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
557 AMGV01000004|CGC17 61455.00 7.0955
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EaquamarinaCBS119918 13118 1182545 0 13118
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KEF57685.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 13 542 1.7e-137 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.26e-106 11 546 5 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.60e-101 9 541 1 531
choline dehydrogenase; Validated
398739 GMC_oxred_C 8.16e-42 396 537 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 3.79e-31 1 534 43 569
Protein HOTHEAD
366272 GMC_oxred_N 4.03e-22 14 307 1 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 2 550 3 538
0.0 13 549 14 537
0.0 2 548 3 536
0.0 2 550 92 627
0.0 2 550 3 538

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.33e-122 14 541 14 526
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
1.03e-121 14 541 14 526
Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
2.91e-121 14 541 14 526
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
1.94e-54 7 545 1 564
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.72e-54 14 545 8 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.77e-121 14 541 14 526
Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
1.13e-69 13 543 6 535
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
4.67e-68 13 541 4 533
Oxygen-dependent choline dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=betA PE=3 SV=1
4.81e-67 13 541 4 533
Oxygen-dependent choline dehydrogenase OS=Staphylococcus xylosus OX=1288 GN=betA PE=3 SV=1
8.70e-67 12 541 6 538
Oxygen-dependent choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000031 0.000010

TMHMM  Annotations      help

There is no transmembrane helices in KEF57685.1.