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CAZyme Information: KEF55609.1

You are here: Home > Sequence: KEF55609.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala aquamarina
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala aquamarina
CAZyme ID KEF55609.1
CAZy Family GH13
CAZyme Description GMC_OxRdtase_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A072P662]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
527 AMGV01000007|CGC1 57794.50 4.9967
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EaquamarinaCBS119918 13118 1182545 0 13118
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KEF55609.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 14 519 1.9e-119 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.34e-97 14 521 7 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 8.00e-88 14 516 5 531
choline dehydrogenase; Validated
398739 GMC_oxred_C 1.02e-38 371 512 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 1.49e-21 15 295 1 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 2.06e-19 13 509 54 569
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.17e-229 6 522 5 535
2.45e-216 1 522 1 535
1.87e-213 1 522 1 535
3.75e-213 1 522 1 535
3.75e-213 1 522 1 535

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.82e-82 14 516 13 526
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
1.15e-81 14 516 13 526
Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
2.26e-81 14 516 13 526
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
1.75e-48 14 516 83 636
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
2.25e-48 14 516 7 560
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.99e-81 14 516 13 526
Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
2.09e-65 15 527 2 538
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
1.02e-57 15 516 2 527
Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1
5.32e-57 4 516 30 571
Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2
2.83e-56 4 516 35 573
Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999957 0.000092

TMHMM  Annotations      help

There is no transmembrane helices in KEF55609.1.