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CAZyme Information: KDQ33460.1

You are here: Home > Sequence: KDQ33460.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pleurotus ostreatus
Lineage Basidiomycota; Agaricomycetes; ; Pleurotaceae; Pleurotus; Pleurotus ostreatus
CAZyme ID KDQ33460.1
CAZy Family GT8
CAZyme Description polysaccharide lyase family 1 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 KL198004|CGC8 43923.77 4.9408
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PostreatusPC15 12460 1137138 164 12296
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KDQ33460.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 74 249 1.7e-51 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226384 PelB 5.40e-06 37 332 49 343
Pectate lyase [Carbohydrate transport and metabolism].
408654 TSP3_bac 0.005 378 397 1 20
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.
366158 Pec_lyase_C 0.009 81 249 28 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.09e-239 23 420 20 417
2.26e-216 16 420 15 419
3.20e-216 16 420 14 419
6.13e-214 16 420 13 418
5.14e-210 16 420 13 416

PDB Hits      help

KDQ33460.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.08e-185 18 420 16 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
2.02e-184 18 420 16 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
8.19e-184 18 420 16 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
1.22e-180 16 420 13 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
8.13e-179 16 420 13 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000785 0.999183 CS pos: 22-23. Pr: 0.9737

TMHMM  Annotations      download full data without filtering help

Start End
7 29