logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: KDQ28749.1

You are here: Home > Sequence: KDQ28749.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pleurotus ostreatus
Lineage Basidiomycota; Agaricomycetes; ; Pleurotaceae; Pleurotus; Pleurotus ostreatus
CAZyme ID KDQ28749.1
CAZy Family GH28
CAZyme Description glycoside hydrolase family 5 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
424 44815.01 4.2424
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PostreatusPC15 12460 1137138 164 12296
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4:20

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 97 398 1e-92 0.9929078014184397

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395098 Cellulase 5.65e-65 135 394 28 271
Cellulase (glycosyl hydrolase family 5).
225344 BglC 1.04e-18 95 394 45 362
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
197593 fCBD 9.07e-13 22 55 1 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 4.97e-12 23 51 1 29
Fungal cellulose binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.89e-206 8 421 6 411
7.51e-196 13 424 13 417
1.51e-188 88 421 33 360
3.40e-177 10 423 8 420
1.20e-176 19 424 21 418

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.61e-190 88 421 14 341
Structrue of a lucidum protein [Ganoderma lucidum],5D8W_B Structrue of a lucidum protein [Ganoderma lucidum],5D8Z_A Structrue of a lucidum protein [Ganoderma lucidum],5D8Z_B Structrue of a lucidum protein [Ganoderma lucidum]
5.47e-157 95 424 3 328
Chain A, Endoglucanase EG-II [Trichoderma reesei],3QR3_B Chain B, Endoglucanase EG-II [Trichoderma reesei]
1.35e-45 95 395 27 310
Crystal structure of the endo-beta-1,4-glucanase Xac0029 from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
3.40e-44 88 409 15 320
Structure of XacCel5A crystallized in the space group P41212 [Xanthomonas citri pv. citri str. 306]
4.21e-44 88 409 15 320
Crystal structure of XacCel5A in the native form [Xanthomonas citri pv. citri str. 306],4W7V_A Crystal structure of XacCel5A in complex with cellobiose [Xanthomonas citri pv. citri str. 306],4W7W_A High-resolution structure of XacCel5A in complex with cellopentaose [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.02e-175 17 424 19 418
Endoglucanase EG-II OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=egl2 PE=1 SV=1
2.31e-174 17 424 19 418
Endoglucanase EG-II OS=Hypocrea jecorina OX=51453 GN=egl2 PE=1 SV=1
5.45e-112 10 415 9 381
Manganese dependent endoglucanase Eg5A OS=Phanerodontia chrysosporium OX=2822231 GN=Eg5A PE=1 SV=2
8.91e-79 99 406 37 325
Endoglucanase 1 OS=Saitozyma flava OX=5416 GN=CMC1 PE=2 SV=1
1.04e-58 17 416 14 385
Endoglucanase gh5-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=gh5-1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000231 0.999758 CS pos: 19-20. Pr: 0.9705

TMHMM  Annotations      help

There is no transmembrane helices in KDQ28749.1.