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CAZyme Information: KDQ27272.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pleurotus ostreatus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Agaricomycetes; ; Pleurotaceae; Pleurotus; Pleurotus ostreatus | |||||||||||
| CAZyme ID | KDQ27272.1 | |||||||||||
| CAZy Family | GH13 | |||||||||||
| CAZyme Description | polysaccharide lyase family 1 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.2:30 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 73 | 250 | 1.3e-78 | 0.994475138121547 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.65e-43 | 86 | 249 | 14 | 185 | Amb_all domain. |
| 226384 | PelB | 1.07e-36 | 1 | 310 | 1 | 342 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.25e-22 | 93 | 250 | 42 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.54e-158 | 1 | 313 | 1 | 313 | |
| 3.57e-132 | 5 | 313 | 8 | 316 | |
| 1.02e-131 | 5 | 313 | 8 | 316 | |
| 1.02e-131 | 5 | 313 | 8 | 316 | |
| 2.21e-130 | 13 | 313 | 14 | 314 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.06e-35 | 35 | 278 | 6 | 274 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 2.05e-21 | 22 | 228 | 3 | 257 | Chain A, Pectate lyase A [Dickeya chrysanthemi],1OOC_B Chain B, Pectate lyase A [Dickeya chrysanthemi],1PE9_A Chain A, Pectate lyase A [Dickeya chrysanthemi],1PE9_B Chain B, Pectate lyase A [Dickeya chrysanthemi] |
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| 1.75e-20 | 30 | 228 | 5 | 246 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
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| 1.86e-20 | 22 | 228 | 3 | 257 | Chain A, Pectate lyase [Dickeya chrysanthemi],1JRG_B Chain B, Pectate lyase [Dickeya chrysanthemi],1JTA_A Chain A, pectate lyase A [Dickeya chrysanthemi] |
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| 8.83e-19 | 27 | 228 | 1 | 213 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.37e-108 | 2 | 313 | 5 | 323 | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1 |
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| 1.76e-107 | 2 | 313 | 5 | 323 | Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1 |
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| 8.19e-103 | 24 | 313 | 28 | 321 | Probable pectate lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyA PE=3 SV=1 |
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| 8.19e-103 | 24 | 313 | 28 | 321 | Probable pectate lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyA PE=3 SV=1 |
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| 4.68e-102 | 21 | 313 | 26 | 321 | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000212 | 0.999765 | CS pos: 25-26. Pr: 0.9587 |