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CAZyme Information: KDQ22750.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pleurotus ostreatus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Agaricomycetes; ; Pleurotaceae; Pleurotus; Pleurotus ostreatus | |||||||||||
| CAZyme ID | KDQ22750.1 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | glycoside hydrolase family 28 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 54 | 351 | 4.2e-48 | 0.803076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 7.41e-25 | 90 | 375 | 48 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215120 | PLN02188 | 1.10e-15 | 88 | 345 | 109 | 367 | polygalacturonase/glycoside hydrolase family protein |
| 165802 | PLN02155 | 6.84e-15 | 92 | 345 | 106 | 356 | polygalacturonase |
| 215426 | PLN02793 | 2.04e-14 | 103 | 364 | 151 | 406 | Probable polygalacturonase |
| 215540 | PLN03010 | 1.14e-13 | 53 | 367 | 105 | 389 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.57e-149 | 4 | 376 | 29 | 396 | |
| 2.80e-139 | 1 | 376 | 27 | 423 | |
| 2.02e-137 | 6 | 376 | 32 | 411 | |
| 2.99e-136 | 1 | 376 | 27 | 423 | |
| 4.83e-133 | 6 | 376 | 31 | 410 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.30e-14 | 92 | 375 | 71 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 3.84e-12 | 92 | 366 | 68 | 342 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.31e-105 | 16 | 376 | 45 | 416 | Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2 |
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| 2.42e-67 | 6 | 366 | 31 | 427 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2 |
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| 2.42e-67 | 6 | 366 | 31 | 427 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1 |
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| 6.90e-67 | 2 | 347 | 28 | 408 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1 |
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| 5.35e-66 | 2 | 347 | 28 | 408 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000039 | 0.000001 |