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CAZyme Information: KAG6620897.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6620897.1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | Pectate lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 129 | 239 | 9.4e-46 | 0.5668449197860963 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 9.91e-23 | 129 | 236 | 2 | 113 | Amb_all domain. |
| 226384 | PelB | 3.73e-09 | 95 | 234 | 69 | 195 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.38e-06 | 117 | 210 | 7 | 98 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 238429 | PKS | 0.002 | 132 | 192 | 327 | 390 | polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.79e-138 | 11 | 239 | 7 | 235 | |
| 1.79e-110 | 21 | 239 | 22 | 240 | |
| 3.32e-91 | 21 | 238 | 28 | 236 | |
| 1.13e-88 | 22 | 239 | 20 | 236 | |
| 1.56e-86 | 28 | 239 | 195 | 397 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.74e-53 | 31 | 239 | 9 | 201 | Pectin Lyase B [Aspergillus niger] |
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| 6.22e-48 | 28 | 236 | 6 | 198 | Pectin Lyase A [Aspergillus niger] |
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| 3.43e-47 | 28 | 236 | 6 | 198 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.51e-55 | 31 | 239 | 27 | 218 | Probable pectin lyase F-1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-1 PE=3 SV=1 |
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| 4.50e-54 | 26 | 238 | 19 | 215 | Probable pectin lyase F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pelF PE=3 SV=1 |
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| 8.92e-54 | 26 | 238 | 19 | 215 | Probable pectin lyase E OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelE PE=3 SV=1 |
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| 1.09e-53 | 11 | 238 | 10 | 221 | Pectin lyase OS=Colletotrichum gloeosporioides OX=474922 GN=PNLA PE=3 SV=1 |
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| 1.66e-53 | 9 | 238 | 8 | 222 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.053047 | 0.946933 | CS pos: 21-22. Pr: 0.7161 |