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CAZyme Information: KAG6620759.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6620759.1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | Pectate lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 123 | 316 | 2.2e-78 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 7.15e-31 | 122 | 318 | 2 | 189 | Amb_all domain. |
| 226384 | PelB | 1.66e-11 | 139 | 332 | 102 | 290 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.89e-10 | 135 | 315 | 31 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.15e-251 | 1 | 409 | 1 | 409 | |
| 4.68e-251 | 1 | 409 | 1 | 409 | |
| 7.65e-175 | 10 | 410 | 10 | 400 | |
| 1.08e-174 | 10 | 410 | 10 | 400 | |
| 1.49e-167 | 1 | 410 | 1 | 400 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.40e-71 | 24 | 375 | 4 | 329 | Pectin Lyase B [Aspergillus niger] |
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| 5.25e-70 | 25 | 368 | 5 | 321 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 5.25e-70 | 25 | 368 | 5 | 321 | Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.25e-82 | 5 | 409 | 6 | 383 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
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| 1.25e-82 | 5 | 409 | 6 | 383 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 5.16e-82 | 6 | 366 | 7 | 341 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 5.16e-82 | 6 | 366 | 7 | 341 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 5.50e-81 | 3 | 368 | 2 | 341 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000210 | 0.999758 | CS pos: 21-22. Pr: 0.9776 |