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CAZyme Information: KAG6618538.1

You are here: Home > Sequence: KAG6618538.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6618538.1
CAZy Family GT60
CAZyme Description Chitin-binding protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
238 25220.56 4.3442
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6618538.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 2 165 8.4e-21 0.9640718562874252

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 3.03e-08 68 166 87 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.
225932 COG3397 3.37e-05 34 172 67 211
Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only].
410624 LPMO_AA10 0.005 67 130 82 141
lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 10 (AA10). AA10 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs), which may act on chitin or cellulose. The family used to be called CBM33. Activities in this family include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54), lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56), lytic chitin monooxygenase (EC 1.14.99.53), and lytic xylan monooxygenase/xylan oxidase (glycosidic bond-cleaving) (EC 1.14.99.-). Also included are viral chitin-binding glycoproteins such as fusolin and spheroidin-like proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.41e-16 56 182 73 200
8.29e-13 1 173 21 193
8.29e-13 1 173 21 193
1.77e-12 1 171 24 195
1.88e-12 56 175 72 191

PDB Hits      help

KAG6618538.1 has no PDB hit.

Swiss-Prot Hits      help

KAG6618538.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000039 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in KAG6618538.1.