logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: KAG6617873.1

You are here: Home > Sequence: KAG6617873.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6617873.1
CAZy Family GT48
CAZyme Description Glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
334 36800.03 4.2749
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6617873.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 120 330 1.4e-16 0.38293650793650796

CDD Domains      help

KAG6617873.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.96e-51 4 334 239 562
1.68e-49 3 334 256 577
1.91e-49 3 334 280 601
2.15e-49 4 330 3 309
2.84e-48 4 330 258 564

PDB Hits      help

KAG6617873.1 has no PDB hit.

Swiss-Prot Hits      help

KAG6617873.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999277 0.000759

TMHMM  Annotations      help

There is no transmembrane helices in KAG6617873.1.