logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: KAG6617175.1

You are here: Home > Sequence: KAG6617175.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6617175.1
CAZy Family GT4
CAZyme Description Beta-xylosidase/alpha-L-arabinofuranosidase 2
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
776 84594.61 5.3782
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 67 317 3.4e-68 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 0.0 24 752 32 779
Probable beta-xylosidase; Provisional
185053 PRK15098 1.65e-101 102 741 118 750
beta-glucosidase BglX.
396478 Glyco_hydro_3_C 4.29e-59 388 621 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
224389 BglX 7.51e-59 101 417 80 363
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747 Glyco_hydro_3 3.91e-35 97 350 81 314
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.74e-209 7 750 13 773
9.89e-208 1 752 3 775
2.24e-206 24 752 33 767
3.06e-206 30 752 39 774
3.06e-206 30 752 39 774

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.13e-162 24 743 5 719
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
3.13e-162 24 743 5 719
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7.54e-146 15 762 21 761
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
7.76e-146 15 762 21 761
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
1.55e-139 24 761 32 758
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.38e-201 24 741 26 756
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
7.18e-199 15 750 35 772
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
5.55e-198 15 750 30 771
Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1
1.11e-197 12 751 37 783
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1
5.79e-195 31 751 46 771
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000643 0.999320 CS pos: 16-17. Pr: 0.9514

TMHMM  Annotations      help

There is no transmembrane helices in KAG6617175.1.